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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015811717.1_cds_XP_016496817.1_11003
CDS Infomation

[gene=LOC107815715] [db_xref=GeneID:107815715] [protein=probable galacturonosyltransferase-like 1] [protein_id=XP_016496817.1] [location=join(41556..42113,42666..43220)] [gbkey=CDS]
Sequence

ATGTGTTTGTGTAGCTTCTCCATAATGCCAAAACTTGGGAGTTTCAAGATCAAGGCCTTT
ATTTCTCTTTTATGGACCATCTCCTTTGATGCACCTAGTGCCGGCGCTATCAATACCAAG
AACTTGCATTTCAAAGAAGCCCCAAAATTCTACAACTCCCCAACTTGTCCTTCTCTTCAC
TTCTCCTCCACCGACACAAATAATGCTACCATCAACTCCACCTCCAATGGAATTTGCTTT
GAAAATGCAGTAAATGTAGCCATGACTCTTGATGCAGCTTATCTCCGAGGGTCAATGGCT
GCGATTCTTTCTGTTCTACAACACTCTTCTTGCCCTGAAAATGTTATCTTCCACTTTGTT
GCTTCTTCCTCCGCTGACACTAATTATCTCAACATCACAATTGCTAATTCATTCCCTTAT
CTTCATTTCACAATTTATCCCTTCCAAGATTCCGGAGTGGCAGGATTAATTTCTACATCC
ATTCGTGCTGCATTAGACTGTCCTCTTAATTATGCTCGAAATTACCTCGCTGATCTTCTT
CCTGGATGTATCCAAAAGGTTGTGTACCTGGATTCAGACCTTGTTCTCGTAGATGACATT
GCCAAGCTGGCAGCAACACCTCTAGGTGAAGAAGCAGTTCTAGCAGCACCAGAATACTGC
AATGCAAATTTCACTACTTATTTCACCCCCACTTTCTGGTCAAACCCTTCGCTTTCTTTG
ACTTTCGCGAACCGAAAACCTTGTTATTTCAACACGGGTGTTATGGTGATTGATCTTGAA
AGATGGAGAGCTGGAGATTATACAACAAAGATTGTAGAATGGATGGAACTTCAGAAGAGA
ATGAGGATTTATGAGTTGGGTTCGTTACCACCTTTTCTGCTTGTTTTTGCTGGAAATATT
GCTCCGGTGGATCATAAGTGGAACCAACATGGTCTTGGAGGAGATAATTTCCGAGGTCTC
TGCCGGAATTTGCACCCTGGTCCAGTGAGCTTATTGCATTGGAGTGGAAAAGGGAAGCCG
TGGGTTCGACTCGATGCGAGCCGGCCTTGTCCATTAGATACCCTCTGGGCACCTTATGAT
CTGCTGCAAACACCTTACGCTCTTGAATCATGA

Peptide Sequence

PEP ID

XP_016496817.1
PEP Infomation

PREDICTED: probable galacturonosyltransferase-like 1 [Nicotiana tabacum]
Sequence

MCLCSFSIMPKLGSFKIKAFISLLWTISFDAPSAGAINTKNLHFKEAPKFYNSPTCPSLH
FSSTDTNNATINSTSNGICFENAVNVAMTLDAAYLRGSMAAILSVLQHSSCPENVIFHFV
ASSSADTNYLNITIANSFPYLHFTIYPFQDSGVAGLISTSIRAALDCPLNYARNYLADLL
PGCIQKVVYLDSDLVLVDDIAKLAATPLGEEAVLAAPEYCNANFTTYFTPTFWSNPSLSL
TFANRKPCYFNTGVMVIDLERWRAGDYTTKIVEWMELQKRMRIYELGSLPPFLLVFAGNI
APVDHKWNQHGLGGDNFRGLCRNLHPGPVSLLHWSGKGKPWVRLDASRPCPLDTLWAPYD
LLQTPYALES

Transcript Sequence

Gene sequence data has not been registered.